Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Whole genome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 049f4aeff4c4a1b8421cac9b1c1c1f0da5848315 |
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PGAP Pipeline, simple user input, PGAPX-134
PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template) |
https://github.com/ncbi/pgap.git
Path: pgap.cwl Branch/Commit ID: f3bc91cf1320f75967ec2719b1506b75f23cb4b6 |
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exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_mouse.cwl Branch/Commit ID: 049f4aeff4c4a1b8421cac9b1c1c1f0da5848315 |
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concatenate-flag.cwl
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https://git.astron.nl/RD/VLBI-cwl.git
Path: workflows/concatenate-flag.cwl Branch/Commit ID: 6fd44f9c1fdc047e31822bbf161dfe82acb9791d |
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tt_kmer_compare_wnode
Pairwise comparison |
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: 4cd1fb565519fbe5f9c462acae01ff608c3784a3 |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: c235dc6d623879a6c4f5fb307f545c9806eb2d23 |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 4cd1fb565519fbe5f9c462acae01ff608c3784a3 |
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scatter-wf1.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/scatter-wf1.cwl Branch/Commit ID: 551d58d409ef2a0fa2e3ab93b85167dd7d4b1833 |
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paramref_arguments_self.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/paramref_arguments_self.cwl Branch/Commit ID: 20f01e04328537714e57d136e242d3e7a9d44266 |
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scatter-valuefrom-inputs-wf1.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/scatter-valuefrom-inputs-wf1.cwl Branch/Commit ID: 551d58d409ef2a0fa2e3ab93b85167dd7d4b1833 |
