Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Detect Docm variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2 |
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pindel parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2 |
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contig LCA
create LCA consistant across input contigs contigs order of precedence - rRNA, single copy gene, LCA of genes |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/contig-lca.workflow.cwl Branch/Commit ID: 721aaf285e1848c3c52da38a1fed95192aeff8f4 |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580 |
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PGAP Pipeline
PGAP pipeline for external usage, powered via containers |
https://github.com/ncbi/pgap.git
Path: wf_common.cwl Branch/Commit ID: 4cd1fb565519fbe5f9c462acae01ff608c3784a3 |
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io-union-input-default-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/io-union-input-default-wf.cwl Branch/Commit ID: 1f3ef888d9ef2306c828065c460c1800604f0de4 |
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workflow.cwl
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https://github.com/reanahub/reana-demo-root6-roofit.git
Path: workflow/cwl/workflow.cwl Branch/Commit ID: 24df2009c4fd6ad54ae629c97942687ffa1ba6e4 |
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vecscreen.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/vecscreen.cwl Branch/Commit ID: f3bc91cf1320f75967ec2719b1506b75f23cb4b6 |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 4cd1fb565519fbe5f9c462acae01ff608c3784a3 |
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fp_filter workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2 |
