Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph amplicon_metrics.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/amplicon_metrics.cwl

Branch/Commit ID: b2f7a697e08220234062a9cf558ba169d255b4a4
workflow graph gcaccess_from_list

https://github.com/ncbi/pgap.git

Path: task_types/tt_gcaccess_from_list.cwl

Branch/Commit ID: fecf185474502599f428158e90edb471dfbfac1b
workflow graph SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination

Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs.

https://github.com/barski-lab/workflows.git

Path: tools/soupx-subworkflow.cwl

Branch/Commit ID: e89b2c17aa5efccef6ca424dec5a0a021bd8d20c
workflow graph schemadef-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl

Branch/Commit ID: 984ad48495f84d3a016cb41a2d1ce7b303248364
workflow graph Test GPU

Print GPU info.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/hello_gpu.cwl

Branch/Commit ID: baefdcb58fcc76e3378cf705fc6a3e69ef35bb47

Packed ID: main
workflow graph umi duplex alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/umi_duplex_alignment.cwl

Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b
workflow graph WGS QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_wgs.cwl

Branch/Commit ID: 6d03a918639a69ddf6a7b93fe9f72128ef37edc3
workflow graph tt_fscr_calls_pass1

https://github.com/ncbi/pgap.git

Path: task_types/tt_fscr_calls_pass1.cwl

Branch/Commit ID: 85e33a80019f8a630cb59ec6663ada7deb83e453
workflow graph WGS QC workflow mouse

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_wgs_mouse.cwl

Branch/Commit ID: 6d03a918639a69ddf6a7b93fe9f72128ef37edc3
workflow graph umi duplex alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: e7e888df9e7d44f036c4c7985e474016ee9e6525