Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph EMG core analysis for Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-core-analysis-v4.cwl

Branch/Commit ID: 5dc7c5c
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 56dafa4
workflow graph ST520111.cwl

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520111.cwl

Branch/Commit ID: main
workflow graph id_to_json_workflow.cwl

https://github.com/sfu-ireceptor/airr-seqaa.git

Path: cwl/id_to_json_workflow.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: flow_dispatch/workflow.cwl

Branch/Commit ID: master
workflow graph bams2gvcf.wBQSR.multisamples.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.wBQSR.multisamples.cwl

Branch/Commit ID: master
workflow graph scatter-wf1.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-wf1.cwl

Branch/Commit ID: main
workflow graph strelka workflow

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/strelka_and_post_processing.cwl

Branch/Commit ID: master
workflow graph wf_trim_and_map_pe.cwl

This workflow takes in appropriate trimming params and demultiplexed reads, and performs the following steps in order: trimx1, trimx2, fastq-sort, filter repeat elements, fastq-sort, genomic mapping, sort alignment, index alignment, namesort, PCR dedup, sort alignment, index alignment

https://github.com/YeoLab/eclip.git

Path: cwl/wf_trim_and_map_pe.cwl

Branch/Commit ID: master
workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/revsort.cwl

Branch/Commit ID: main