Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	PGAP Pipeline PGAP pipeline for external usage, powered via containers	https://github.com/ncbi/pgap.git Path: wf_common.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082
	variant-calling.cwl	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/modules/variant-calling.cwl Branch/Commit ID: bf7303dd44d7f0ec3d3cd2e0829e28a78bd941e2
	xenbase-chipseq-se.cwl XenBase workflow for analysing ChIP-Seq single-end data	https://github.com/datirium/workflows.git Path: workflows/xenbase-chipseq-se.cwl Branch/Commit ID: 94471ee6c01b7bc17102e45e56e7366c2a52acdf
	echo-wf-default.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/echo-wf-default.cwl Branch/Commit ID: e2ec740fccc81ff7071dcd607c5c158fbc0dfb90
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: e649fcb1092905c539be026a3f23c82d5b0871d2
	xenbase-sra-to-fastq-se.cwl	https://github.com/datirium/workflows.git Path: subworkflows/xenbase-sra-to-fastq-se.cwl Branch/Commit ID: 94471ee6c01b7bc17102e45e56e7366c2a52acdf
	structural-variants.cwl	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/modules/structural-variants.cwl Branch/Commit ID: bf7303dd44d7f0ec3d3cd2e0829e28a78bd941e2
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/examples/1st-workflow.cwl Branch/Commit ID: e2ec740fccc81ff7071dcd607c5c158fbc0dfb90
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2
	HS Metrics workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: 44ada20f3eeb59005d5bd999d2435102e9bae991