Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph BLAST against rRNA db

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_blastn.cwl

Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e
workflow graph blastp_wnode_naming

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastp_wnode_naming.cwl

Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e
workflow graph module-1-scatter-chunk

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-1.scatter.chunk.cwl

Branch/Commit ID: e96613177b18b76c6fac98b945660bde65ebdd80
workflow graph tt_hmmsearch_wnode.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_hmmsearch_wnode.cwl

Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_bqsr.cwl

Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9
workflow graph module-2

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-2.cwl

Branch/Commit ID: e96613177b18b76c6fac98b945660bde65ebdd80
workflow graph WGS QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_wgs.cwl

Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9
workflow graph count-lines1-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl

Branch/Commit ID: e2ec740fccc81ff7071dcd607c5c158fbc0dfb90
workflow graph Subworkflow that runs cnvkit in single sample mode and returns a vcf file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cnvkit_single_sample.cwl

Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9