Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Hello World

Outputs a message using echo

https://github.com/common-workflow-language/workflows.git

Path: workflows/hello/hello-param.cwl

Branch/Commit ID: 51ab8e00185c4ffd3f1cdea367ca398fbcbd56da

workflow graph alignment_bwa_mem_prod.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/alignment_bwa_mem_prod.cwl

Branch/Commit ID: 39ddc4b79dc93076787046f591225dc7ca3100ce

workflow graph readgroup_fastq_pe.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroup_fastq_pe.cwl

Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de

workflow graph hi-c-processing-pairs-nore-nonorm.cwl

https://github.com/4dn-dcic/pipelines-cwl.git

Path: cwl_awsem_v1/hi-c-processing-pairs-nore-nonorm.cwl

Branch/Commit ID: 91d67820264c8ebac829174cb1d0c7c5e30c613f

workflow graph unix_align_workflow.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: tools/unix/unix_align_workflow.cwl

Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de

workflow graph workflow1.cwl

https://github.com/petehague/Stoa.git

Path: actions/workflow1.cwl

Branch/Commit ID: 3b1e8f2d6f7c54b60f1b33d5d413de71bbf1f1cd

workflow graph count-lines8-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl

Branch/Commit ID: 691dea280b40ac177b4a38b33375139ca0ce7e81

workflow graph 03-map-pe.cwl

ATAC-seq 03 mapping - reads: PE

https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-pe.cwl

Branch/Commit ID: c269cecf317c699d6f3a0f44782e90914bce62b5

workflow graph exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome.cwl

Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40

workflow graph index sim seq

create sorted / filtered similarity file with feature sequences, and index by md5

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/index_sim_seq.workflow.cwl

Branch/Commit ID: 1844de830f6935901849ccd9966685fbf13e8042