Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Per-chromosome pindel

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_cat.cwl

Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2
workflow graph align_merge_sas

https://github.com/ncbi/pgap.git

Path: task_types/tt_align_merge_sas.cwl

Branch/Commit ID: f390475a4e0898d4933f0a28dae278aa35803eb1
workflow graph exome alignment and tumor-only variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/exome.cwl

Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580
workflow graph Detect DoCM variants

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/docm_germline.cwl

Branch/Commit ID: 5677d6df78453e62d2e78ab485f216feaef91681
workflow graph count-lines8-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines8-wf.cwl

Branch/Commit ID: b60a42e3cc417c5b75b88fd7c6681abcc7ff5b89
workflow graph kmer_build_tree

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_build_tree.cwl

Branch/Commit ID: 4cd1fb565519fbe5f9c462acae01ff608c3784a3
workflow graph assemble.cwl

Assemble a set of reads using SKESA

https://github.com/ncbi/pgap.git

Path: assemble.cwl

Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4
workflow graph assembly-2.cwl

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/conditionals/assembly/assembly-2.cwl

Branch/Commit ID: fff6fa392370b56e1fe7c374167ba73df3018775
workflow graph RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/rnaseq.cwl

Branch/Commit ID: db0a91eb094d0a7c58042d4264986ea042dd4827
workflow graph kmer_cache_retrieve

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_cache_retrieve.cwl

Branch/Commit ID: f390475a4e0898d4933f0a28dae278aa35803eb1