Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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STAR-Alignment-PE
This workflow aligns the fastq files using STAR for paired-end samples |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Alignments/star-alignment.cwl Branch/Commit ID: master |
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wf_C3_C4_map_present_NA_MOD.cwl
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https://github.com/idaks/cwl_modeling.git
Path: yw_cwl_modeling/yw2cwl_parser/example_sql/C3_C4_map_present_NA_MOD/wf_C3_C4_map_present_NA_MOD.cwl Branch/Commit ID: master |
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collate_unique_SSU_headers.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 3f85843 |
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epigenome-chip-seq.cwl
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https://github.com/pitagora-network/DAT2-cwl.git
Path: workflow/epigenome-chip-seq/epigenome-chip-seq.cwl Branch/Commit ID: main |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: annotator_sub_wf.cwl Branch/Commit ID: develop |
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collate_unique_SSU_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 43d2fb8 |
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main-somatic.cwl
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https://github.com/FarahZKhan/bcbio_test_cwlprov.git
Path: somatic/somatic-workflow/main-somatic.cwl Branch/Commit ID: master |
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816_wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/816_wf.cwl Branch/Commit ID: main |
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super-enhancer.cwl
Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl) |
https://github.com/Barski-lab/workflows.git
Path: workflows/super-enhancer.cwl Branch/Commit ID: master |
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workflow_sig.cwl
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https://github.com/mr-c/cwltests.git
Path: cwl/workflow_sig.cwl Branch/Commit ID: pack_test |
