Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph CUTnRUN_pipeline_packed.cwl#main

https://github.com/CompEpigen/ChIPseq_workflows.git

Path: CWL/workflows/CUTnRUN_pipeline_packed.cwl

Branch/Commit ID: 503df61c4d7fd6078a4089b62382a3c6811d7749

Packed ID: main
workflow graph step-valuefrom3-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/step-valuefrom3-wf.cwl

Branch/Commit ID: 6f78ea7ddf746edb06436d57e085aec485cd7bc2
workflow graph alignment for nonhuman with qc

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_wgs_nonhuman.cwl

Branch/Commit ID: ecac0fda44df3a8f25ddfbb3e7a023fcbe4cbd0f
workflow graph WGS QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_wgs.cwl

Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55
workflow graph rnaseq-se-dutp.cwl

Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/rnaseq-se-dutp.cwl

Branch/Commit ID: d80d4f126eb60579dc3c3faf90996acc802155f2
workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55
workflow graph mpi_simple_wf.cwl

Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/mpi_simple_wf.cwl

Branch/Commit ID: 8949fc2d68efe128ce841739d1190645dbd233bb
workflow graph tt_univec_wnode.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_univec_wnode.cwl

Branch/Commit ID: fecf185474502599f428158e90edb471dfbfac1b
workflow graph umi duplex alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55
workflow graph count-lines7-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines7-wf.cwl

Branch/Commit ID: 984ad48495f84d3a016cb41a2d1ce7b303248364