Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bisulfite QC tools
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 3034168d652bfa930ba09af20e473a4564a8010d |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 001fab592188cb525afa1c4db6226b833faec106 |
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downsample unaligned BAM and align
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601 |
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wgs alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/wgs_alignment.cwl Branch/Commit ID: 68eda647259849ca81ac0bb07a24bc8a4465a630 |
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count-lines17-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines17-wf.cwl Branch/Commit ID: 4d06b9efd26c5813c13684ebcc95547bb75ddfcc |
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WGS QC workflow mouse
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs_mouse.cwl Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6 |
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fail-unconnected.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/fail-unconnected.cwl Branch/Commit ID: 4d06b9efd26c5813c13684ebcc95547bb75ddfcc |
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exome alignment with qc, no bqsr, no verify_bam_id
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_exome_mouse.cwl Branch/Commit ID: 54846feabbf008c1946db2a86d87252e0edd95b0 |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 68eda647259849ca81ac0bb07a24bc8a4465a630 |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 68eda647259849ca81ac0bb07a24bc8a4465a630 |
