Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe |
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Variant calling workflow for single interval
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https://github.com/arvados/arvados-tutorial.git
Path: WGS-processing/cwl/helper/gatk-wf-with-interval.cwl Branch/Commit ID: e3b01c795c65bbfa0c09f9e7b8ffb80a950746d7 |
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downsample unaligned BAM and align
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https://github.com/genome/cancer-genomics-workflow.git
Path: unaligned_bam_to_bqsr/downsample_workflow.cwl Branch/Commit ID: e027d487e5cefba4f446f2036b933955608dbc31 |
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Chipseq alignment with qc and creating homer tag directory
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/chipseq.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6 |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants_mouse.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6 |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb |
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io-int-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/io-int-wf.cwl Branch/Commit ID: ca8e6661b5cab1f017e5bc4024650722dae4d50b |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 844c10a4466ab39c02e5bfa7a210c195b8efa77a |
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kfdrc_process_pe_readslist2.cwl
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https://github.com/inab/kf-alignment-workflow.git
Path: subworkflows/kfdrc_process_pe_readslist2.cwl Branch/Commit ID: cbf58e7ccb096f72b9804ea924c5405b29ec87df |
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Replace legacy AML Trio Assay
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/aml_trio_cle.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6 |
