Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Detect Variants workflow for WGS pipeline	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: a08de598edc04f340fdbff76c9a92336a7702022
	gathered exome alignment and somatic variant detection for cle purpose	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_exome_cle_gathered.cwl Branch/Commit ID: a08de598edc04f340fdbff76c9a92336a7702022
	cnv_exomedepth CNV ExomeDepth calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_exome_depth.cwl Branch/Commit ID: 3bb03c9bac5b2150632d008aec28fb27c510e908
	samtools_sort	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/samtools_sort.cwl Branch/Commit ID: 3bb03c9bac5b2150632d008aec28fb27c510e908
	bam_filtering BAM filtering	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/bam_filtering.cwl Branch/Commit ID: 3bb03c9bac5b2150632d008aec28fb27c510e908
	cnv_codex CNV CODEX calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_codex.cwl Branch/Commit ID: 3bb03c9bac5b2150632d008aec28fb27c510e908
	cnv_manta CNV Manta calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_manta.cwl Branch/Commit ID: 3bb03c9bac5b2150632d008aec28fb27c510e908
	final_filtering Final filtering	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/final_filtering.cwl Branch/Commit ID: 3bb03c9bac5b2150632d008aec28fb27c510e908
	picard_markduplicates Mark duplicates	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/picard_markduplicates.cwl Branch/Commit ID: 3bb03c9bac5b2150632d008aec28fb27c510e908
	bwa_mem	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/bwa_mem.cwl Branch/Commit ID: 3bb03c9bac5b2150632d008aec28fb27c510e908