Explore Workflows

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: d4e5e533ee6dc93bfaf1c4bbb2ab40812a8f4792

https://github.com/NLeSC/scriptcwl.git

Path: tests/data/echo.scattered.cwl

Branch/Commit ID: 56274fd44550c65385a1ab127402b7339fc18043

https://github.com/mr-c/cwltests.git

Path: cwl/packed.cwl

Branch/Commit ID: 97d571496beb2411121f764c92e3b18de34396fe

Packed ID: workflow_select_shape.cwl

This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: oxog_varbam_annotate_wf.cwl

Branch/Commit ID: 6366ed398da10019b6d81a789291af6d909f28f4

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: ef3c7b2638b3125ee9628d292d014e332cee83b0

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: bcfe5f9affd23d52467f69b4b21d1098f0ca95d7

Testing: align sequences with bwa mem, then convert ot BAM

https://github.com/standage/FirstCWLWorkflow.git

Path: Dockstore.cwl

Branch/Commit ID: 151f050e28505576a2dc5f4f294ad3fab957ae5a

Create emblem textures

https://gitlab.com/unduthegun/stellaris-emblem-lab.git

Path: textures/textures.cwl

Branch/Commit ID: 3a842d7ae8c964c9e972b412c80d779dbcee618a

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: qc/workflow_wgs.cwl

Branch/Commit ID: 8c5ae3dbabfe73e0a577b91b25ef5b0b32f388cb

https://github.com/klimstef/testing-for-Haqseq.git

Path: cwl_s/testDirLayout.cwl

Branch/Commit ID: 7dbdb861d6bcf674862a1aaccb9a619784b09bc3