Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	tRNA_selection.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/tRNA_selection.cwl Branch/Commit ID: ef3c7b2638b3125ee9628d292d014e332cee83b0
	collate_unique_SSU_headers.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: caea457b17388fdc5cb088364c194504ae736bdd
	tRNA_selection.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/tRNA_selection.cwl Branch/Commit ID: c1f8b22dc4da88c998cb00f4b2bebdff8c3632d7
	oxog_varbam_annotate_wf.cwl This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `	https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git Path: oxog_varbam_annotate_wf.cwl Branch/Commit ID: b38a8a4785746b8267913ea5389e21ae6dc921a3
	rRNA_selection.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/rRNA_selection.cwl Branch/Commit ID: 930a2cf6fff820c2461b42dd79d71d9379343013
	clustering.cwl	https://github.com/Epigenomics-Screw/Screw.git Path: cwl/clustering.cwl Branch/Commit ID: eca4d48b08fef0a81518ce3441ed47fcfff412a6
	oxog_sub_wf.cwl This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!	https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git Path: oxog_sub_wf.cwl Branch/Commit ID: 6366ed398da10019b6d81a789291af6d909f28f4
	oxog_sub_wf.cwl This is a subworkflow - this is not meant to be run as a stand-alone workflow!	https://github.com/ICGC-TCGA-PanCancer/pcawg-oxog-filter.git Path: oxog_sub_wf.cwl Branch/Commit ID: 123a3151d35f98e442e703d903dc3e1d72f3c4b0
	zip_and_index_vcf.cwl This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.	https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git Path: zip_and_index_vcf.cwl Branch/Commit ID: 6366ed398da10019b6d81a789291af6d909f28f4
	rRNA_selection.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/rRNA_selection.cwl Branch/Commit ID: c1f8b22dc4da88c998cb00f4b2bebdff8c3632d7