Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph chip-seq-alignment-bowtie.cwl

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/chip-seq-alignment-bowtie.cwl

Branch/Commit ID: b5a440939ac6022ee81aeeb0dd7daf3983228a61
workflow graph Create Genomic Collection for Bacterial Pipeline

https://github.com/ncbi/pgap.git

Path: genomic_source/wf_genomic_source.cwl

Branch/Commit ID: 8af4e2aabf43d5e3c7162efae4ad4649df5601e2
workflow graph count-lines4-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl

Branch/Commit ID: 4d4bbc301c81cbbae9b7f40fb3da3fa16d900fe3
workflow graph BAT_calling_latest.cwl

https://github.com/CompEpigen/PipelineOlympics.git

Path: CWL/workflows/BAT/tools/BAT_calling_latest.cwl

Branch/Commit ID: 72ad937a444b6603983f19595ba4a3434557e006
workflow graph stdout-wf_v1_1.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/stdout-wf_v1_1.cwl

Branch/Commit ID: aa13f7bad47e8df2349bdebd163e1830537d7f93
workflow graph scatter-wf2_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/scatter-wf2_v1_2.cwl

Branch/Commit ID: aa13f7bad47e8df2349bdebd163e1830537d7f93
workflow graph wf_get_peaks_scatter_se.cwl

The \"main\" workflow. Takes fastq files generated using the seCLIP protocol (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5991800/) and outputs candidate RBP binding regions (peaks). runs: wf_get_peaks_se.cwl through scatter across multiple samples.

https://github.com/yeolab/eclip.git

Path: cwl/wf_get_peaks_scatter_se.cwl

Branch/Commit ID: c0fffc4979a92371dc0667a03e3d957bf7f77600
workflow graph scatterfail.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatterfail.cwl

Branch/Commit ID: 766d58b47180d92618074679eb9f3c6c30acf638
workflow graph step_valuefrom5_wf_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step_valuefrom5_wf_v1_2.cwl

Branch/Commit ID: aa13f7bad47e8df2349bdebd163e1830537d7f93
workflow graph gsnap_multilib.cwl

https://github.com/CompEpigen/PipelineOlympics.git

Path: CWL/workflows/GSNAP/gsnap_multilib.cwl

Branch/Commit ID: 72ad937a444b6603983f19595ba4a3434557e006