Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Create Genomic Collection for Bacterial Pipeline
|
https://github.com/ncbi-gpipe/pgap.git
Path: genomic_source/wf_genomic_source.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
|
|
|
Run genomic CMsearch (Rfam rRNA)
|
https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
|
|
|
spurious_annot
|
https://github.com/ncbi-gpipe/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
|
|
|
Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
|
https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
|
|
|
gp_makeblastdb
|
https://github.com/ncbi-gpipe/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
|
|
|
Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
|
https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
|
|
|
Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)
|
https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
|
|
|
spurious_annot pass2
|
https://github.com/ncbi-gpipe/pgap.git
Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
|
|
|
EPOS-IT Array Curl WF
Downloads data based on an array of strings representing rest urls and a curl download workflow. |
https://github.com/andrejsim/epos-cwl-workflows.git
Path: epos_accept_url_array_scatter.cwl Branch/Commit ID: e2adc03ee6b36549d0f6977789164b05908ae4a2 |
|
|
|
step-valuefrom-wf.cwl
|
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/step-valuefrom-wf.cwl Branch/Commit ID: 22490926651174c6cbe01c76c2ded3c9e8d0ee6f |
