Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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protein_extract
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https://github.com/ncbi-gpipe/pgap.git
Path: progs/protein_extract.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
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tt_hmmsearch_wnode.cwl
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
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Filter Protein Alignments I
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https://github.com/ncbi-gpipe/pgap.git
Path: protein_alignment/wf_align_filter.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
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Seed Search Compartments
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https://github.com/ncbi-gpipe/pgap.git
Path: protein_alignment/wf_seed.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
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Filter Protein Seeds I; Find ProSplign Alignments I
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https://github.com/ncbi-gpipe/pgap.git
Path: protein_alignment/wf_compart_filter_prosplign.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: 886df9de6713e06228d2560c40f451155a196383 |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/cancer-genomics-workflow.git
Path: unaligned_bam_to_bqsr/workflow.cwl Branch/Commit ID: e4c851d65f460e8f48ca184120044fce72cb2433 |
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Seed Protein Alignments I
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https://github.com/ncbi-gpipe/pgap.git
Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
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Non-Coding Bacterial Genes
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https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df |
