Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
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workflow.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: flow_download/workflow.cwl Branch/Commit ID: 677d79c721ad5f7a7e09b693d7f3fe2da70826e2 |
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workflow.cwl
|
https://github.com/nal-i5k/organism_onboarding.git
Path: flow_dispatch/workflow.cwl Branch/Commit ID: 677d79c721ad5f7a7e09b693d7f3fe2da70826e2 |
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readme-genePrediction-workflow.cwl
|
https://github.com/nal-i5k/organism_onboarding.git
Path: flow_create_readme/readme-genePrediction-workflow.cwl Branch/Commit ID: 677d79c721ad5f7a7e09b693d7f3fe2da70826e2 |
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workflow.cwl
|
https://github.com/nal-i5k/organism_onboarding.git
Path: flow_md5checksums/workflow.cwl Branch/Commit ID: 677d79c721ad5f7a7e09b693d7f3fe2da70826e2 |
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tt_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 656113dcac0de7cef6cff6c688f61441ee05872a |
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tt_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 5e92165ac2c11608ab2db42fe2d66eabe72dbb40 |
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samtools_view_sam2bam
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https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/abstract_operations/subworkflows/samtools_view_sam2bam.cwl Branch/Commit ID: 26ae4914651d5b3e188028d1e9d88a391b3f6730 |
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Raw sequence data to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 788bdc99c1d5b6ee7c431c3c011eb30d385c1370 |
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bam to trimmed fastqs and biscuit alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 788bdc99c1d5b6ee7c431c3c011eb30d385c1370 |
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adapter for sequence_align_and_tag
Some workflow engines won't stage files in our nested structure, so parse it out here |
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: 788bdc99c1d5b6ee7c431c3c011eb30d385c1370 |
