Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph iwdr_with_nested_dirs.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/iwdr_with_nested_dirs.cwl

Branch/Commit ID: 86c46cb397de029e4c91f02cca40fa2b54d22f37
workflow graph GEM peak calling

This workflow execute peak calling using GEM

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/gem.cwl

Branch/Commit ID: 793e327acc1d159ff601043ee88651fca62350dd
workflow graph conflict.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/conflict.cwl

Branch/Commit ID: 912282ed4d528aa33c33b8a8d99e6992b6ded760

Packed ID: main
workflow graph directory.cwl

Inspect provided directory and return filenames. Generate a new directory and return it (including content).

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/directory.cwl

Branch/Commit ID: efd59864c24d97e6d0d1d273025d3ef9003fa44d
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: bc3e2a0666812d541418a82d0dfc4f0bba595be3
workflow graph count-lines9-wf-noET.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines9-wf-noET.cwl

Branch/Commit ID: e515226f8ac0f7985cd94dae4a301150adae3050
workflow graph workflow-transeq-blast-clustalo.cwl

https://github.com/ebi-wp/webservice-cwl.git

Path: workflows/workflow-transeq-blast-clustalo.cwl

Branch/Commit ID: 215ed5c67a58df03be61e976a93588075bd255a5
workflow graph qiime2 create feature visual summaries

FeatureTable and FeatureData summaries from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step2-dada2.cwl

Branch/Commit ID: c15f7d33153a36bf08509c3ea046d17ebe07c6bc

Packed ID: qiime2-04-features.cwl
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_bqsr.cwl

Branch/Commit ID: baa16f20e91a3f11f8475896e2a66cee183c0d7d
workflow graph umi molecular alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_umi_molecular.cwl

Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405