Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
rnaseq-alignment-circRNA-multiple-samples
This workflow aligns multiple samples using STAR for paired-end samples to be used in circRNA pipeline |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Alignments/star-alignment-circRNA-multiple-samples-default.cwl Branch/Commit ID: e1c19e64f6fc210f65472ee227786d33c9b4909a |
|
|
|
workflow-blast-phobius.cwl
|
https://github.com/ebi-wp/webservice-cwl.git
Path: workflows/workflow-blast-phobius.cwl Branch/Commit ID: 215ed5c67a58df03be61e976a93588075bd255a5 |
|
|
|
revsort.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/revsort.cwl Branch/Commit ID: 86c46cb397de029e4c91f02cca40fa2b54d22f37 |
|
|
|
Exome QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 258bd4353ad1ca7790b3ae626bf42ab8194e7561 |
|
|
|
Detect Docm variants
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: bc3e2a0666812d541418a82d0dfc4f0bba595be3 |
|
|
|
mutect parallel workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: bc3e2a0666812d541418a82d0dfc4f0bba595be3 |
|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: bc3e2a0666812d541418a82d0dfc4f0bba595be3 |
|
|
|
pindel parallel workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: bc3e2a0666812d541418a82d0dfc4f0bba595be3 |
|
|
|
strelka workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: bc3e2a0666812d541418a82d0dfc4f0bba595be3 |
|
|
|
Varscan Workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: bc3e2a0666812d541418a82d0dfc4f0bba595be3 |
