Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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fastqc_star_samtools.cwl
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https://github.com/ALuesink/CWL_test.git
Path: fastqc_star_samtools.cwl Branch/Commit ID: 4058d6e7da1f652c4a60fd7d35c8cf396b5285e2 |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 75ea689c0a8c9902b4598b453455857cb08e885a |
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tt_kmer_top_n.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: a402541b8530f30eab726c160da90a23036847a1 |
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tt_fscr_calls_pass1
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https://github.com/ncbi/pgap.git
Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: a402541b8530f30eab726c160da90a23036847a1 |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: a402541b8530f30eab726c160da90a23036847a1 |
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CLE gold vcf evaluation workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_eval_cle_gold.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0 |
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transform_pack.cwl#readgroup_fastq_pe.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/transform_pack.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b Packed ID: readgroup_fastq_pe.cwl |
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transform_pack.cwl#conditional_bamindex.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/transform_pack.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b Packed ID: conditional_bamindex.cwl |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf_nonhuman.cwl Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405 |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: 4e2a295bb6c8b4982402ee80538a0cdb8ee6b6dd |
