Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl Branch/Commit ID: 932da3abed7166bd5a962871386ba2c31d47b85c |
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kmer_ref_compare_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 669166450aba26f3560c15960eeebdd0313a7f84 |
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exome alignment with qc, no bqsr, no verify_bam_id
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_exome_mouse.cwl Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6 |
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scatter-wf1.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/scatter-wf1.cwl Branch/Commit ID: 5f27e234b4ca88ed1280dedf9e3391a01de12912 |
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linc_target.cwl
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https://git.astron.nl/eosc/prefactor3-cwl.git
Path: workflows/linc_target.cwl Branch/Commit ID: f4d9e23e09d2ab8dc266e3d9e164709e5c0f2a13 |
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etl_http.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/etl_http.cwl Branch/Commit ID: 6698fbd8d0a6155d2008d4e89ab1110fbef9ebbf |
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Hello World
Outputs a message using echo |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/hello-workflow.cwl Branch/Commit ID: f8f24046875aa90764cf54736df926363aa326d1 |
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workflow.cwl
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https://github.com/inab/Wetlab2Variations.git
Path: cwl-workflows/demonstrator/workflow.cwl Branch/Commit ID: 529167e6e1087ac298d362ca9eeccaa7bcec4b50 |
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abundance
abundace profiles from annotated files, for protein and/or rna |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/abundance-clca.workflow.cwl Branch/Commit ID: 1b1bb901b849b32cbfc4cb58d736bb617d514319 |
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1st-workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/1st-workflow.cwl Branch/Commit ID: 58274ef14adbbf7e09dbf6e5170780179669078b |
