Explore Workflows

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_top_n.cwl

Branch/Commit ID: 6d5e27ee7c01effb14c40619df9c4f6d321a25bf

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroup_fastq_se.cwl

Branch/Commit ID: f34d3963b33e0a379338cb3cb75b0016f012bf2c

rna / protein - qc, annotation, index, abundance

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/assembled.workflow.cwl

Branch/Commit ID: 1b1bb901b849b32cbfc4cb58d736bb617d514319

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroup_fastq_se_http.cwl

Branch/Commit ID: f34d3963b33e0a379338cb3cb75b0016f012bf2c

https://github.com/teoloup/cwltools.git

Path: variantcalling_trimmed_mutectwithpon_workflow.cwl

Branch/Commit ID: 2485f0ecf1f7e6cd57e45ef13fddebbc508b77d4

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/bulk_process.cwl

Branch/Commit ID: 7fed36f1bd63d7a3479135473b21fa4c501519a1

Obtaining and importing data from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

https://github.com/duke-gcb/bespin-cwl.git

Path: packed/qiime2-step1-import-demux.cwl

Branch/Commit ID: e2dc95d4f12210359360d814382e7201d836dfcf

Packed ID: qiime2-01-import-data.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_align_merge_sas.cwl

Branch/Commit ID: 3472e6539f6abbc3aa77db22d5816b9e96647f5e

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastn_wnode.cwl

Branch/Commit ID: 669166450aba26f3560c15960eeebdd0313a7f84

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatterfail.cwl

Branch/Commit ID: f8f24046875aa90764cf54736df926363aa326d1