Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph checkm_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_checkm_wnode.cwl

Branch/Commit ID: dd53e6d71282b0619ef7123ba2d258b30aef2dd0
workflow graph Run tRNAScan

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_trnascan.cwl

Branch/Commit ID: dd53e6d71282b0619ef7123ba2d258b30aef2dd0
workflow graph aws_freebayes.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/aws_freebayes.cwl

Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b
workflow graph group-isoforms-batch.cwl

Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored.

https://github.com/Barski-lab/workflows.git

Path: tools/group-isoforms-batch.cwl

Branch/Commit ID: d09a44ebc8d092ffd8370a324c9e84b37a593d38
workflow graph result_chunker_subwf.cwl

https://github.com/kinow/pipeline-v5.git

Path: utils/result-file-chunker/result_chunker_subwf.cwl

Branch/Commit ID: 337033417c49dcf4ab394aba1ec517b97637da13
workflow graph final_chunking.cwl

https://github.com/kinow/pipeline-v5.git

Path: workflows/subworkflows/final_chunking.cwl

Branch/Commit ID: 337033417c49dcf4ab394aba1ec517b97637da13
workflow graph kmer_cache_store

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_cache_store.cwl

Branch/Commit ID: e351f650524b532f85820b8e53855010b35046c2
workflow graph foreign_screening.cwl

https://github.com/ncbi/pgap.git

Path: vecscreen/foreign_screening.cwl

Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3
workflow graph rnaseq-pe-dutp.cwl

Runs RNA-Seq BioWardrobe basic analysis with strand specific pair-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/rnaseq-pe-dutp.cwl

Branch/Commit ID: b25b17651171f32005e9d879a9a049382f044baf
workflow graph revsort_step_bad_schema.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort_step_bad_schema.cwl

Branch/Commit ID: 8949fc2d68efe128ce841739d1190645dbd233bb