Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622 |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622 |
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mutect parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622 |
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pindel parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622 |
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Detect Docm variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622 |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622 |
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wgs alignment and tumor-only variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_wgs.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f |
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exome alignment and tumor-only variant detection
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/pipelines/exome.cwl Branch/Commit ID: 9c9e6a6a48eb321804ce772a2c2c12b4f2f32529 |
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bam to trimmed fastqs and biscuit alignments
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 9c9e6a6a48eb321804ce772a2c2c12b4f2f32529 |
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Varscan Workflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8 |
