Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/rnaseq.cwl

Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9
workflow graph wffail.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/wffail.cwl

Branch/Commit ID: 9781b4c89c3126e2b19f6feaf4e7327d71e754e8
workflow graph cluster_blastp_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: task_types/tt_cluster_and_qdump.cwl

Branch/Commit ID: ed27a47e80a85c76cb7285a78965d59537f79f10
workflow graph Create Genomic Collection for Bacterial Pipeline, ASN.1 input

https://github.com/ncbi/pgap.git

Path: genomic_source/wf_genomic_source_asn.cwl

Branch/Commit ID: ed27a47e80a85c76cb7285a78965d59537f79f10
workflow graph Seed Search Compartments

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed.cwl

Branch/Commit ID: ed27a47e80a85c76cb7285a78965d59537f79f10
workflow graph final-workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: final-workflow.cwl

Branch/Commit ID: 6f0888f9e4b15172109dcb1db2ee63f154a79100
workflow graph adapter for sequence_align_and_tag

Some workflow engines won't stage files in our nested structure, so parse it out here

 https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl

Branch/Commit ID: 046e980d131ebaf71f76599a749e2294c40c9d0d
workflow graph md5sum_v11.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/md5sum_v11.cwl

Branch/Commit ID: fa7b09bd27a2c45236c94d916c3d26e90a5a7baf
workflow graph workflow_input_format_expr_v1_1.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/workflow_input_format_expr_v1_1.cwl

Branch/Commit ID: fa7b09bd27a2c45236c94d916c3d26e90a5a7baf
workflow graph directory.cwl

Inspect provided directory and return filenames. Generate a new directory and return it (including content).

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/directory.cwl

Branch/Commit ID: d3c7bd5d6c409e857b98f9034a55952ca95afdb3