Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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no-outputs-wf.cwl
Workflow without outputs. |
https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/no-outputs-wf.cwl Branch/Commit ID: 5f27e234b4ca88ed1280dedf9e3391a01de12912 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/pvacseq.cwl Branch/Commit ID: 0fae6bb8a15c634b054ec747e31bdfbc67954c92 |
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protein similarities
run diamond on mutlple DBs and merge-sort results |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/protein-diamond.workflow.cwl Branch/Commit ID: 1b1bb901b849b32cbfc4cb58d736bb617d514319 |
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default-wf5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-wf5.cwl Branch/Commit ID: f8f24046875aa90764cf54736df926363aa326d1 |
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bam to trimmed fastqs and HISAT alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 0fae6bb8a15c634b054ec747e31bdfbc67954c92 |
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exome alignment and tumor-only variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/exome.cwl Branch/Commit ID: 891c996dbd23d8154ec7609a56da3de841ae124c |
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wffail.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/wffail.cwl Branch/Commit ID: f8f24046875aa90764cf54736df926363aa326d1 |
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screen out taxa
Remove sequences which align against a reference set using bowtie2. The references are preformatted (index files) |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/organism-screening.workflow.cwl Branch/Commit ID: 1b1bb901b849b32cbfc4cb58d736bb617d514319 |
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foreign_screening.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/foreign_screening.cwl Branch/Commit ID: 6d5e27ee7c01effb14c40619df9c4f6d321a25bf |
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tt_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 6d5e27ee7c01effb14c40619df9c4f6d321a25bf |
