Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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gathered exome alignment and somatic variant detection for cle purpose
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_cle_gathered.cwl Branch/Commit ID: 2ae0a374fab650757cdae4391c8cbd32f02edf97 |
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basic_quote.cwl
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https://github.com/common-workflow-lab/wdl-cwl-translator.git
Path: wdl2cwl/tests/cwl_files/basic_quote.cwl Branch/Commit ID: edf5e184d5bb20a8865b1f2412a0fe51504406c9 |
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grepsort workflow
a workflow that performs grep followed by sort |
https://github.com/ResearchObject/runcrate.git
Path: tests/data/grepsort-run-1/snapshot/grepsort.cwl Branch/Commit ID: 1fcacb124a71569d0a175aaee68a9f3a498bb2d3 |
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wf.cwl
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https://github.com/ResearchObject/runcrate.git
Path: tests/data/no-output-run-1/snapshot/wf.cwl Branch/Commit ID: 1fcacb124a71569d0a175aaee68a9f3a498bb2d3 |
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mpi_simple_wf.cwl
Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mpi_simple_wf.cwl Branch/Commit ID: f0a844af6f93883fcacb3572a6366124a50d0909 |
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qc-assembled.workflow.cwl
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https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/qc-assembled.workflow.cwl Branch/Commit ID: 1b1bb901b849b32cbfc4cb58d736bb617d514319 |
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Run tRNAScan
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 6d5e27ee7c01effb14c40619df9c4f6d321a25bf |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_orf_hmms.cwl Branch/Commit ID: 6d5e27ee7c01effb14c40619df9c4f6d321a25bf |
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basic_sep.cwl
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https://github.com/common-workflow-lab/wdl-cwl-translator.git
Path: wdl2cwl/tests/cwl_files/basic_sep.cwl Branch/Commit ID: edf5e184d5bb20a8865b1f2412a0fe51504406c9 |
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mut3.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut3.cwl Branch/Commit ID: f0a844af6f93883fcacb3572a6366124a50d0909 |
