Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	js-expr-req-wf.cwl#wf	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/js-expr-req-wf.cwl Branch/Commit ID: d9ec78aa015755d07a1c60a9d11f1f5f0a012e1f Packed ID: wf
	FastQC - a quality control tool for high throughput sequence data FastQC - a quality control tool for high throughput sequence data ===================================== FastQC aims to provide a simple way to do some quality control checks on raw sequence data coming from high throughput sequencing pipelines. It provides a modular set of analyses which you can use to give a quick impression of whether your data has any problems of which you should be aware before doing any further analysis. The main functions of FastQC are: - Import of data from FastQ files (any variant) - Providing a quick overview to tell you in which areas there may be problems - Summary graphs and tables to quickly assess your data - Export of results to an HTML based permanent report - Offline operation to allow automated generation of reports without running the interactive application	https://github.com/datirium/workflows.git Path: workflows/fastqc.cwl Branch/Commit ID: e0a30aa1ad516dd2ec0e9ce006428964b840daf4
	fastqtosam_pe.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/fastqtosam/fastqtosam_pe.cwl Branch/Commit ID: b110a23e2efaaadfd4feca4f9e130946d1c5418d
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: be465ad19b07378f3f863f2c4e0019b420c859f2
	extract_readgroup_fastq_pe_http.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_readgroup_fastq_pe_http.cwl Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c
	collate_unique_SSU_headers.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 9a72f76a5c8c874278205fcdeb93362a0d8a5152
	js-expr-req-wf.cwl#wf	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/js-expr-req-wf.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 Packed ID: wf
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf_nonhuman.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c
	Immunotherapy Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/immuno.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4