Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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trim-rnaseq-se-dutp.cwl
Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/trim-rnaseq-se-dutp.cwl Branch/Commit ID: b25b17651171f32005e9d879a9a049382f044baf |
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split-directions.cwl
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https://git.astron.nl/RD/VLBI-cwl.git
Path: workflows/split-directions.cwl Branch/Commit ID: 86441858fc31364cfa9d3da6a653c155591126dd |
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Salmon quantification, FASTQ -> H5AD count matrix
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: steps/salmon-quantification.cwl Branch/Commit ID: 0e042776c8446115e70144fae5497465a5ff1e7e |
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harmonization_bwa_mem_no_trim.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/harmonization_bwa_mem_no_trim.cwl Branch/Commit ID: c84973e6e96d5232152a87bdd40ee8f5bab470c0 |
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alignment_novoalign.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_novoalign.cwl Branch/Commit ID: c84973e6e96d5232152a87bdd40ee8f5bab470c0 |
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conflict.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/conflict.cwl Branch/Commit ID: 07ebbea2bdf97955060c1dd563580b386388519b Packed ID: main |
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allele-rnaseq-pe.cwl
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https://github.com/Barski-lab/workflows.git
Path: workflows/allele-rnaseq-pe.cwl Branch/Commit ID: b25b17651171f32005e9d879a9a049382f044baf |
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chipseq-se.cwl
Runs ChIP-Seq BioWardrobe basic analysis with single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/chipseq-se.cwl Branch/Commit ID: b25b17651171f32005e9d879a9a049382f044baf |
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blastp_wnode_struct
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3 |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_ab_initio_training.cwl Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3 |
