Explore Workflows

This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs

https://github.com/svonworl/oxog-dockstore-tools.git

Path: qa_check_subwf.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step-valuefrom2-wf_v1_1.cwl

Branch/Commit ID: 33a706bc6b85f1c2824af05bebe7aae19bcb6597

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines11-extra-step-wf-noET.cwl

Branch/Commit ID: ad6f77c648ae9f0eaa2fd53ba7032b0523e12de8

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/steplevel-resreq.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: 5e82174

Workflow to merge a large number of maf files into a single consensus bed file

https://github.com/mskcc/pluto-cwl.git

Path: cwl/consensus_bed.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: 3f85843

Run failtool which will fail

https://github.com/Duke-GCB/calrissian.git

Path: input-data/fail-wf.cwl

Branch/Commit ID: 9c50cb35991b49217a9e7f4550e921dc36171695

https://github.com/common-workflow-lab/wdl-cwl-translator.git

Path: wdl2cwl/tests/cwl_files/align_and_count_multiple_report.cwl

Branch/Commit ID: ed0ce8d076784685a2e49173241b63e427d7a320

https://git.astron.nl/RD/LINC.git

Path: workflows/linc_target/tec_and_amp.cwl

Branch/Commit ID: 0601b0801bc238c464e954803c16b48bd7e6b14e