Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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cond-wf-003.1.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/cond-wf-003.1.cwl Branch/Commit ID: 33a706bc6b85f1c2824af05bebe7aae19bcb6597 |
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gcaccess_from_list
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https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: dev |
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schemadef-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl Branch/Commit ID: 45d6236961118f409c45c1967e1f44b167b737a0 |
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scatter-wf3_v1_1.cwl#main
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/scatter-wf3_v1_1.cwl Branch/Commit ID: 0fe3ca65d19ed76b7c5095cf2d915658d26b87fb Packed ID: main |
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structural-variants-pair.cwl
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https://github.com/mskcc/argos-cwl.git
Path: modules/pair/structural-variants-pair.cwl Branch/Commit ID: cf4867f47da089ba545aa10432fd95d7e2d20126 |
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Indices builder from GBOL RDF (TTL)
Workflow to build different indices for different tools from a genome and transcriptome. This workflow expects an (annotated) genome in GBOL ttl format. Steps: - SAPP: rdf2gtf (genome fasta) - SAPP: rdf2fasta (transcripts fasta) - STAR index (Optional for Eukaryotic origin) - bowtie2 index - kallisto index |
https://git.wur.nl/unlock/cwl.git
Path: cwl/workflows/workflow_indexbuilder.cwl Branch/Commit ID: master |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: c211071 |
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count-lines7-wf_v1_0.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/count-lines7-wf_v1_0.cwl Branch/Commit ID: 4a8390d897913c3776a0d2b2a01e1e6134b968bc |
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stdout-wf_v1_2.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/stdout-wf_v1_2.cwl Branch/Commit ID: 4a8390d897913c3776a0d2b2a01e1e6134b968bc |
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Filter single sample sv vcf from paired read callers(Manta/Smoove)
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl Branch/Commit ID: master |
