Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph QIIME2 Step 1 paired end sequences

QIIME2 Import and Demux Step 1 paired end sequences

https://github.com/bespin-workflows/16s-qiime2.git

Path: 16s-step1-import-demux-paired.cwl

Branch/Commit ID: develop
workflow graph qa_check_subwf.cwl

This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: qa_check_subwf.cwl

Branch/Commit ID: develop
workflow graph count-lines11-extra-step-wf-noET.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines11-extra-step-wf-noET.cwl

Branch/Commit ID: main
workflow graph preprocessAndCluster.cwl

https://github.com/Epigenomics-Screw/Screw.git

Path: cwl/preprocessAndCluster.cwl

Branch/Commit ID: scatter
workflow graph timelimit2-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/timelimit2-wf.cwl

Branch/Commit ID: main
workflow graph kmer_seq_entry_extract_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl

Branch/Commit ID: b174aec5dba5524367061a2c60472c318430f4f5
workflow graph picard_markduplicates

Mark duplicates

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl

Branch/Commit ID: master
workflow graph md5sum-workflow.cwl

https://github.com/dockstore-testing/md5sum-checker.git

Path: md5sum/md5sum-workflow.cwl

Branch/Commit ID: 1.0.1
workflow graph qc-assembled.workflow.cwl

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/qc-assembled.workflow.cwl

Branch/Commit ID: 355b90a923e1f7ab4a7095ecad856436e0372a77
workflow graph tRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 708fd97