Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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count-lines14-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines14-wf.cwl Branch/Commit ID: 6397014050177074c9ccd0d771577f7fa9f728a3 |
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sec-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf.cwl Branch/Commit ID: c6cced7a2e6389d2eb43342e702677ccb7c7497c |
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extract_gencoll_ids
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https://github.com/ncbi/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6 |
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pennant_wf.cwl
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https://github.com/lanl/BEE.git
Path: beeflow/data/cwl/bee_workflows/pennant/pennant_wf.cwl Branch/Commit ID: 3c2491e42c3e980186b6c0942ea2dcaef93a2a0c |
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blastp_wnode_struct
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: f3bc91cf1320f75967ec2719b1506b75f23cb4b6 |
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QIIME2 Step 2 (DADA2 option)
QIIME2 DADA2, feature summaries, phylogenetic diversity tree, taxonomic analysis and ancom |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: 777dbcd05b5d115371dcda6d54ebaf75dae8afb8 Packed ID: main |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/pvacseq.cwl Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2 |
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env-wf1.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/env-wf1.cwl Branch/Commit ID: e515226f8ac0f7985cd94dae4a301150adae3050 |
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step-valuefrom2-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/step-valuefrom2-wf.cwl Branch/Commit ID: d9ec78aa015755d07a1c60a9d11f1f5f0a012e1f |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl Branch/Commit ID: 7797879b801042984b5ae651754815fc3f77ea41 |
