Explore Workflows

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/bwa_mem.cwl

Branch/Commit ID: 3bb03c9b

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: f6b5196

run 2-pass dedup: algo LocusCollector + algo Dedup sequentially

https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/dedup-2-pass.cwl

Branch/Commit ID: master

INTEGRATE workflow: untar, tophat align, samtools index, Integrate fusion

https://github.com/Jeltje/integrate.git

Path: Dockstore.cwl

Branch/Commit ID: master

Workflow to merge a large number of maf files into a single consensus maf file for use with GetBaseCountsMultiSample

https://github.com/mskcc/pluto-cwl.git

Path: cwl/consensus_maf.cwl

Branch/Commit ID: master

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA12878-chr20/NA12878-platinum-chr20-workflow/wf-alignment.cwl

Branch/Commit ID: b1f00f3ae914ca66aa0fa864869e934ddb69a715

https://github.com/nal-i5k/organism_onboarding.git

Path: apolloServer-createOrganism-workflow.cwl

Branch/Commit ID: e332b88ced14c57ec7a0f2edbdcd61afb1228e77

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/toolkit/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

Branch/Commit ID: 0.4.0

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 5833078

https://github.com/audrium/reana-demo-scattered-helloworld.git

Path: workflow/cwl/helloworld-nested.cwl

Branch/Commit ID: master