Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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foreign_screening.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/foreign_screening.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b |
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EMG pipeline v3.0 (single end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: 5dc7c5c |
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trim-chipseq-se.cwl
Runs ChIP-Seq BioWardrobe basic analysis with single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/trim-chipseq-se.cwl Branch/Commit ID: master |
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Nested workflow example
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/double-nested.cwl Branch/Commit ID: 250e6849c8c1dc3ae15f11ae1355ef3486f87263 |
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standard_bam_to_collapsed_qc.cwl
This is a workflow to go from standard bams to collapsed bams and QC results. |
https://github.com/mskcc/ACCESS-Pipeline.git
Path: workflows/subworkflows/standard_bam_to_collapsed_qc.cwl Branch/Commit ID: master |
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mut3.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut3.cwl Branch/Commit ID: 250e6849c8c1dc3ae15f11ae1355ef3486f87263 |
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fusion_simulation_workflow.cwl
Fusion Simulation Workflow |
https://github.com/Sage-Bionetworks/rnaseqSim.git
Path: workflow/fusion_simulation_workflow.cwl Branch/Commit ID: master |
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GSC Paired Jobs
Serial combination of KnowEnG tools |
https://github.com/knoweng-research/cwl-specification.git
Path: code/workflow.gsc.cwl Branch/Commit ID: master |
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Chipseq alignment with qc and creating homer tag directory
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/pipelines/chipseq.cwl Branch/Commit ID: low-vaf |
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create_diploid_genome.cwl
Diploid Genome Creation Workflow |
https://github.com/Sage-Bionetworks/rnaseqSim.git
Path: workflow/create_diploid_genome.cwl Branch/Commit ID: master |
