Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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assm_assm_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_assm_assm_blastn_wnode.cwl Branch/Commit ID: master |
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bacterial_orthology
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https://github.com/ncbi/pgap.git
Path: bacterial_orthology/wf_bacterial_orthology.cwl Branch/Commit ID: dev |
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SetParameterFromExternal
Receive parameter update (e.g., by querying an external source like a configuration or calibration database) or by expert input (e.g., by a member of a telescope team or a simulation pipeline expert). |
https://github.com/gammasim/workflows.git
Path: workflows/SetParameterFromExternal.cwl Branch/Commit ID: main |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: test |
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lobSTR-workflow.cwl
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https://github.com/common-workflow-language/workflows.git
Path: workflows/lobSTR/lobSTR-workflow.cwl Branch/Commit ID: 17b65ea19d81527090fded62ffa0e |
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ValidateReadout
Validate readout (if applicable for high and low gain chain). |
https://github.com/gammasim/workflows.git
Path: workflows/ValidateReadout.cwl Branch/Commit ID: e0525b01ebee3ac1b4f0128a0002c6543a5918cf |
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kmer_build_tree
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: test |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 68b828ac482956a03325623d817780986f34fb31 |
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msi.cwl
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https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/subworkflows/msi.cwl Branch/Commit ID: master |
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ValidatePixelStatus
Validate pixel on/off status (disabled or broken pixels / channels) |
https://github.com/gammasim/workflows.git
Path: workflows/ValidatePixelStatus.cwl Branch/Commit ID: e0525b01ebee3ac1b4f0128a0002c6543a5918cf |
