Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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umi molecular alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55 |
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QIIME2 Step 3
QIIME2 Alpha/beta diversity analysis and Alpha rarefaction plotting |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step3-alpha-analysis.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: main |
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Filter single sample sv vcf from depth callers(cnvkit/cnvnator)
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/sv_depth_caller_filter.cwl Branch/Commit ID: low-vaf |
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ValidateCameraTimeResponse
Validate camera time response. |
https://github.com/gammasim/workflows.git
Path: workflows/ValidateCameraTimeResponse.cwl Branch/Commit ID: main |
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count-lines13-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines13-wf.cwl Branch/Commit ID: e270bab4f9694da8d46241094341fd0453bfcfc8 |
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final_filtering
Final filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/final_filtering.cwl Branch/Commit ID: 1.1.3 |
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echo-wf-default.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/echo-wf-default.cwl Branch/Commit ID: ea9f8634e41824ac3f81c3dde698d5f0eef54f1b |
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CroMaSt.cwl
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https://gitlab.inria.fr/capsid.public_codes/CroMaSt.git
Path: CroMaSt.cwl Branch/Commit ID: main |
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calculate_contamination_workflow.cwl
GATK4.1.2 Calculate tumor-normal contamination workflow |
https://github.com/nci-gdc/gatk4_mutect2_cwl.git
Path: subworkflows/calculate_contamination_workflow.cwl Branch/Commit ID: master |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: qc/workflow_exome.cwl Branch/Commit ID: toil_compatibility |
