Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
pipeline-se-blacklist-removal.cwl
ATAC-seq pipeline - reads: SE - with blacklist removal |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/pipeline-se-blacklist-removal.cwl Branch/Commit ID: master |
|
|
|
echo-wc_inline.cwl
Counts words of a message via echo and wc |
https://github.com/NLeSC/scriptcwl.git
Path: tests/data/workflows/echo-wc_inline.cwl Branch/Commit ID: master |
|
|
|
predictions.cwl
|
https://github.com/ResearchObject/workflow-run-crate.git
Path: docs/examples/draft/ml-predict-pipeline-streamflow/predictions.cwl Branch/Commit ID: main |
|
|
|
sc_atac_seq_prep_process_init.cwl
|
https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git
Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl Branch/Commit ID: c338cd3 |
|
|
|
download_gtf.cwl
|
https://github.com/yyoshiaki/VIRTUS2.git
Path: workflow/download_gtf.cwl Branch/Commit ID: master |
|
|
|
docker_VisIVO_ImpFilterView_Workflow_GADGET_PD.cwl
|
https://github.com/VisIVOLab/VisIVOCWL.git
Path: Workflow_4/docker_VisIVO_ImpFilterView_Workflow_GADGET_PD.cwl Branch/Commit ID: main |
|
|
|
manta.cwl
|
https://github.com/mskcc/ACCESS-Pipeline.git
Path: workflows/subworkflows/manta.cwl Branch/Commit ID: master |
|
|
|
PGAP Pipeline, simple user input, PGAPX-134
PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template) |
https://github.com/ncbi/pgap.git
Path: pgap.cwl Branch/Commit ID: master |
|
|
|
facets
|
https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/facets.cwl Branch/Commit ID: f3f070b4c0cce2cbcdab78c10f2f88abfb78586a |
|
|
|
Bacterial Annotation, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)
|
https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_2nd_pass.cwl Branch/Commit ID: test |
