Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph js_output_workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/js_output_workflow.cwl

Branch/Commit ID: aaaece1c097c3f06afa21f7ecddcc85519e2bb2b
workflow graph kallisto-demo.cwl

https://github.com/puentesdiaz/workflows.git

Path: workflows/kallisto-demo.cwl

Branch/Commit ID: master
workflow graph Pipeline for evaluating differential expression of genes across datasets

https://github.com/hubmapconsortium/rna-data-products.git

Path: pipeline.cwl

Branch/Commit ID: main
workflow graph count-lines11-null-step-wf-noET.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines11-null-step-wf-noET.cwl

Branch/Commit ID: ad6f77c648ae9f0eaa2fd53ba7032b0523e12de8
workflow graph Calculate FDA-requested metrics on all aligned and unaligned sequence files

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/generate_fda_metrics.cwl

Branch/Commit ID: master
workflow graph etl_http.cwl

https://github.com/denis-yuen/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/etl_http.cwl

Branch/Commit ID: master
workflow graph biowardrobe_chipseq_se.cwl

The workflow is used to run CHIP-Seq basic analysis with single-end input FASTQ file. In outputs it returns coordinate sorted BAM file alongside with index BAI file, quality statistics of the input FASTQ file, reads coverage in a form of bigWig file, peaks calling data in a form of narrowPeak or broadPeak files.

https://github.com/Barski-lab/ga4gh_challenge.git

Path: biowardrobe_chipseq_se.cwl

Branch/Commit ID: v0.0.5
workflow graph foreign_screening.cwl

https://github.com/ncbi/pgap.git

Path: vecscreen/foreign_screening.cwl

Branch/Commit ID: test
workflow graph env-wf2.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/env-wf2.cwl

Branch/Commit ID: main
workflow graph umi duplex alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b