Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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transform.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/transform.cwl Branch/Commit ID: 1.0 |
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find_hotspots_in_normals.cwl
Workflow to find hotspot VAFs from duplex (for Tumor sample) and unfiltered (for Normal sample) pileups. These inputs are all required to be sorted in the same order: sample_ids patient_ids sample_classes unfiltered_pileups duplex_pileups |
https://github.com/andurill/access-pipeline.git
Path: workflows/subworkflows/find_hotspots_in_normals.cwl Branch/Commit ID: master |
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collapsed_fastq_to_bam.cwl
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https://github.com/andurill/ACCESS-Pipeline.git
Path: workflows/marianas/collapsed_fastq_to_bam.cwl Branch/Commit ID: master |
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align_merge_sas
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 2c4c3c5e30e751f4793a5b015bbc5960ef6b03da |
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bed_to_coverage_track.cwl
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https://github.com/CompEpigen/ATACseq_workflows.git
Path: CWL/workflow_modules/bed_to_coverage_track.cwl Branch/Commit ID: master |
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Create Genomic Collection for Bacterial Pipeline, ASN.1 input
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https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: dev |
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abra_workflow.cwl
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https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/ABRA/abra_workflow.cwl Branch/Commit ID: master |
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bams2gvcf.woBQSR_female.cwl
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https://github.com/ddbj/human-reseq.git
Path: Workflows/bams2gvcf.woBQSR_female.cwl Branch/Commit ID: master |
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module-1
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-1.cwl Branch/Commit ID: 2.4.x |
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wf_get_peaks_trim_partial_se.cwl
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https://github.com/YeoLab/eclip.git
Path: cwl/wf_get_peaks_trim_partial_se.cwl Branch/Commit ID: master |
