Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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preprocess_vcf.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: preprocess_vcf.cwl Branch/Commit ID: 1.0.0 |
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cond-wf-002.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/conditionals/cond-wf-002.cwl Branch/Commit ID: main |
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MACE ChIP-exo peak caller workflow for single-end samples
This workflow execute peak caller and QC from ChIP-exo for single-end samples using MACE |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-exo/peak-caller-MACE-SE.cwl Branch/Commit ID: master |
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cwlsite.cwl
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https://github.com/common-workflow-language/cwl-website.git
Path: site/cwlsite.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: f993cad |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: 930a2cf |
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workflow-blast-phobius.cwl
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https://github.com/ebi-wp/webservice-cwl.git
Path: workflows/workflow-blast-phobius.cwl Branch/Commit ID: master |
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alignment_workflow_md5checker.cwl
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https://github.com/DataBiosphere/topmed-workflows.git
Path: aligner/topmed-cwl/workflow/alignment_workflow_md5checker.cwl Branch/Commit ID: develop |
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umi per-lane alignment subworkflow
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: No_filters_detect_variants |
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EMG pipeline v4.0 (single end version)
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v4-single.cwl Branch/Commit ID: master |
