Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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EMG pipeline v3.0 (single end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: a8abd0e |
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js-expr-req-wf.cwl#wf
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/js-expr-req-wf.cwl Branch/Commit ID: master Packed ID: wf |
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01-qc-pe.cwl
ChIP-seq 01 QC - reads: PE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ChIP-seq_pipeline/01-qc-pe.cwl Branch/Commit ID: master |
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pcawg_oxog_wf.cwl
This workflow will perform OxoG filtering on a set of VCFs. It will produce VCFs and their associated index files. |
https://github.com/ICGC-TCGA-PanCancer/pcawg-oxog-filter.git
Path: pcawg_oxog_wf.cwl Branch/Commit ID: master |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_gvcf.cwl Branch/Commit ID: master |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: 0746e12 |
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create_snap_and_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: create_snap_and_analyze.cwl Branch/Commit ID: 4b2af54 |
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Bacterial Annotation, ab initio (first pass) searched against AntiFam
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_ab_initio_antifam.cwl Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3 |
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rhapsody_pipeline_2.0.cwl#VDJ_GatherCalls.cwl
VDJ_GatherCalls collect the outputs from the multi-processed VDJ step into one file. |
https://github.com/Chi-CRL/cwl_check_workflow.git
Path: rhapsody_pipeline_2.0.cwl Branch/Commit ID: main Packed ID: VDJ_GatherCalls.cwl |
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tt_fscr_calls_pass1
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https://github.com/ncbi/pgap.git
Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3 |
