Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph preprocess.cwl

https://github.com/ncbi-hackathons/epigenomics_cwl.git

Path: cwl/tools/preprocess.cwl

Branch/Commit ID: master
workflow graph NonSpliced RNAseq workflow

Workflow for NonSpliced RNAseq data alignment with multiple aligners. Steps: - workflow_illumina_quality.cwl: - FastQC (control) - fastp (trimming) - bowtie2 (read mapping) - sam_to_sorted-bam - featurecounts (transcript read counts) - kallisto (transcript [pseudo]counts)

https://git.wur.nl/unlock/cwl.git

Path: cwl/workflows/workflow_RNAseq_NonSpliced.cwl

Branch/Commit ID: master
workflow graph bqsr-flow-distr.cwl

Run BQSR pre+post+plot flow with distribution

 https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/bqsr-flow-distr.cwl

Branch/Commit ID: master
workflow graph wf_gen_paleocar_model3.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/gen_paleocar_models/wf_gen_paleocar_model3.cwl

Branch/Commit ID: master
workflow graph tRNA_selection.cwl

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: master
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 3f85843
workflow graph Protein_Inference_workflow.cwl

https://github.com/adamscharlotte/CWL-workflow.git

Path: Protein_Inference_workflow.cwl

Branch/Commit ID: master
workflow graph scatter-valuefrom-wf4.cwl#main

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-valuefrom-wf4.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph gene_extractor.cwl

https://github.com/ngs-mstb/micgent.git

Path: python/lib/MICGENT/data/cwl/gene_extractor.cwl

Branch/Commit ID: master
workflow graph steplevel-resreq.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/steplevel-resreq.cwl

Branch/Commit ID: main