Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exomeseq-gatk4-03-organizedirectories.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: flow_apollo2_data_processing/processing/workflow.cwl

Branch/Commit ID: master
workflow graph GATK4_SomaticVariantCaller_4_1_3_0.cwl

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/GATK4_SomaticVariantCaller_4_1_3_0.cwl

Branch/Commit ID: master
workflow graph exomeseq-gatk4-02-variantdiscovery.cwl

https://github.com/bespin-workflows/exomeseq-gatk4.git

Path: subworkflows/exomeseq-gatk4-02-variantdiscovery.cwl

Branch/Commit ID: develop
workflow graph Hello World

Outputs a message using echo

 https://gitlab.cs.man.ac.uk/soiland-reyes/test1337.git

Path: hello.cwl

Branch/Commit ID: master
workflow graph Perform SV calling of sample vs matched control using Delly, Lumpy, and Manta

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/sv_caller.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/FAIR-tools/workflow-description.git

Path: cwl/workflow.cwl

Branch/Commit ID: main
workflow graph GEM peak calling

This workflow execute peak calling using GEM

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/gem.cwl

Branch/Commit ID: master
workflow graph intersect_intervals.cwl

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/intersect_intervals.cwl

Branch/Commit ID: master
workflow graph exome alignment and germline variant detection

https://github.com/genome/cancer-genomics-workflow.git

Path: detect_variants/germline_detect_variants.cwl

Branch/Commit ID: toil_compatibility