Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cnv_manta

CNV Manta calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/cnv_manta.cwl

Branch/Commit ID: 1.1.3
workflow graph assm_assm_blastn_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_assm_assm_blastn_wnode.cwl

Branch/Commit ID: master
workflow graph vector_cleanup

This workflow detect and remove vectors from a DNA fasta file

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/vector-cleanup.cwl

Branch/Commit ID: master
workflow graph CreateSymlink-workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: CreateSymlink-workflow.cwl

Branch/Commit ID: master
workflow graph download_gtf.cwl

https://github.com/yyoshiaki/VIRTUS2.git

Path: workflow/download_gtf.cwl

Branch/Commit ID: master
workflow graph star_samtools_stringtie_prepDE_DESeq2.cwl

https://github.com/rawgene/cwl.git

Path: workflows/star_samtools_stringtie_prepDE_DESeq2.cwl

Branch/Commit ID: master
workflow graph ProGENI

network-guided gene prioritization method implementation by KnowEnG that ranks gene measurements by their correlation to observed phenotypes

 https://github.com/KnowEnG/cwl-gene-prioritization.git

Path: Dockstore.cwl

Branch/Commit ID: master
workflow graph wf_step3.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/additional_test_cases/wf_step3.cwl

Branch/Commit ID: master
workflow graph bismark-genome-preparation.cwl

bismark genome preparation workflow

 https://github.com/pitagora-network/DAT2-cwl.git

Path: workflow/epigenome-bs-seq/bismark-genome-preparation/bismark-genome-preparation.cwl

Branch/Commit ID: main
workflow graph cnv_exomedepth

CNV ExomeDepth calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/abstract_operations/subworkflows/cnv_exome_depth.cwl

Branch/Commit ID: master