Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph msi.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/subworkflows/msi.cwl

Branch/Commit ID: master
workflow graph samtools_sort

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/abstract_operations/subworkflows/samtools_sort.cwl

Branch/Commit ID: master
workflow graph final_filtering

Final filtering

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/final_filtering.cwl

Branch/Commit ID: 1.0.5
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: f6b5196
workflow graph iwdr-passthrough-successive.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/iwdr-passthrough-successive.cwl

Branch/Commit ID: 0037b6d673437f220987916fea61d3832797095d
workflow graph linc_target.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/linc_target.cwl

Branch/Commit ID: cc03d87fe6d51216a74f38c6ba0b9dffb8e6ee81
workflow graph gatk-best-practice-generic-germline-short-variant-per-sample-cal_decomposed.cwl

https://github.com/sevenbridges-openworkflows/Broad-Best-Practice-Germline-snps-and-indels-variant-calling-CWL1.0-workflow-GATK-4.1.0.0.git

Path: gatk-best-practice-generic-germline-short-variant-per-sample-cal_decomposed.cwl

Branch/Commit ID: master
workflow graph VIRTUS.PE.cwl

https://github.com/yyoshiaki/VIRTUS2.git

Path: workflow/VIRTUS.PE.cwl

Branch/Commit ID: master
workflow graph bwameth_trim_align_merge_sort_dedup.cwl

https://github.com/ifishlin/Benchmarking_CWL.git

Path: workflows/bwameth/tools/bwameth_trim_align_merge_sort_dedup.cwl

Branch/Commit ID: main
workflow graph snapanalysis_setup_and_analyze.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/snapanalysis_setup_and_analyze.cwl

Branch/Commit ID: v1.0