Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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EMG pipeline v3.0 (single end version)
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: master |
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collate_unique_rRNA_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_rRNA_headers.cwl Branch/Commit ID: 0fed1c9 |
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minibam_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/svonworl/oxog-dockstore-tools.git
Path: minibam_sub_wf.cwl Branch/Commit ID: master |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: downsample_and_recall |
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04-peakcall-se.cwl
ATAC-seq 04 quantification - SE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/04-peakcall-se.cwl Branch/Commit ID: v1.0.0 |
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revcomp_with_rename.cwl
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https://github.com/alexbarrera/GGR-cwl.git
Path: workflows/workflows/sanbi_cwltutorial/revcomp/revcomp_with_rename.cwl Branch/Commit ID: master |
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mutect parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: master |
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Find reads with predicted coding sequences above 60 AA in length
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/orf_prediction.cwl Branch/Commit ID: 43d2fb8 |
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canine_annotation_module.cwl
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https://github.com/d3b-center/canine-dev.git
Path: subworkflows/canine_annotation_module.cwl Branch/Commit ID: master |
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Gathered Downsample and HaplotypeCaller
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/gathered_downsample_and_recall.cwl Branch/Commit ID: master |
