Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Subworkflow to allow calling cnvkit with cram instead of bam files
|
https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: downsample_and_recall |
|
|
|
assm_assm_blastn_wnode
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_assm_assm_blastn_wnode.cwl Branch/Commit ID: a33936cca222084cf68e00076255359688b6708a |
|
|
|
merge and annotate svs with population allele freq
|
https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: No_filters_detect_variants |
|
|
|
Replace legacy AML Trio Assay
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/aml_trio_cle.cwl Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb |
|
|
|
Replace legacy AML Trio Assay
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/aml_trio_cle.cwl Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263 |
|
|
|
exome alignment and somatic variant detection for cle purpose
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_cle.cwl Branch/Commit ID: 449bc7e45bb02316d040f73838ef18359e770268 |
|
|
|
kmer_seq_entry_extract_wnode
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: a33936cca222084cf68e00076255359688b6708a |
|
|
|
wgs alignment with qc
|
https://github.com/fgomez02/analysis-workflows.git
Path: definitions/pipelines/wgs_alignment.cwl Branch/Commit ID: No_filters_detect_variants |
|
|
|
count-lines8-wf-noET.cwl
|
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines8-wf-noET.cwl Branch/Commit ID: master |
|
|
|
infuse_pipeline.cwl
|
https://github.com/cancerit/cgpRna.git
Path: cwls/infuse_pipeline.cwl Branch/Commit ID: feature/test_for_cwlviewer |
