Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	qsm_pipeline_v1.cwl	https://github.com/MGuevaraO/qsm_pipeline.git Path: qsm_pipeline_v1.cwl Branch/Commit ID: main
	workflow-htcondorcern.cwl	https://github.com/reanahub/reana-demo-root6-roofit.git Path: workflow/cwl/workflow-htcondorcern.cwl Branch/Commit ID: master
	running cellranger mkfastq and count	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: downsample_and_recall
	Atmopsheric Calibration This workflow performs calibrates atmosphere and produces an atmospheric model and an extinction hypercube.	https://gitlab.cta-observatory.org/cta-computing/dpps/dpps-workflows.git Path: workflows/calibpipe/AtmosphericCalibrations/uc-cp-100.cwl Branch/Commit ID: main
	Bisulfite alignment and QC	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: downsample_and_recall
	workflow.cwl	https://github.com/FarahZKhan/scalability-reproducibility-chapter.git Path: CWL/workflow.cwl Branch/Commit ID: master
	FASTQ to BQSR	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: downsample_and_recall
	WGS processing workflow for single sample	https://github.com/arvados/arvados-tutorial.git Path: WGS-processing/cwl/helper/bwamem-gatk-report-wf.cwl Branch/Commit ID: main
	make_final_outputs_workflow.cwl	https://github.com/NCI-GDC/gdc-rnaseq-cwl.git Path: rnaseq-star-align/subworkflows/rnaseq_processing/make_final_outputs_workflow.cwl Branch/Commit ID: master
	preprocess_vcf.cwl This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.	https://github.com/icgc-tcga-pancancer/pcawg-snv-indel-annotation.git Path: preprocess_vcf.cwl Branch/Commit ID: master

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