Explore Workflows

For CMRxRecon validation

https://github.com/CmrxRecon/CMRxRecon2024-snippets.git

Path: workflow-task2.cwl

Branch/Commit ID: master

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

Branch/Commit ID: 0.5.0_test

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/assembly/func_ann_and_post_processing-subwf.cwl

Branch/Commit ID: master

https://github.com/NCGM-genome/WGSpipeline.git

Path: Workflows/germline-gpu-v4.1.1.cwl

Branch/Commit ID: main

https://github.com/YangYang-Lcos/legacy.git

Path: workflows/compile/compile1.cwl

Branch/Commit ID: master

Packed ID: main

https://github.com/RenskeW/cwlprov-provenance.git

Path: sl_prov_question/scenario3/nested.cwl

Branch/Commit ID: main

STARR-seq 03 mapping - reads: PE

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/03-map-pe.cwl

Branch/Commit ID: master

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/kfdrc_sentieon_alignment_wf.cwl

Branch/Commit ID: master

Worfklow combining an SRA fetch from NCBI with a fastq-dump cmd

https://github.com/common-workflow-library/bio-cwl-tools.git

Path: sratoolkit/prefetch_fastq.cwl

Branch/Commit ID: release

https://github.com/stain/topmed-workflows.git

Path: aligner/sbg-alignment-cwl/topmed-alignment-checker.cwl

Branch/Commit ID: 4c46a709e7b986a09b9eb27ccdb0540e69e006