Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: bb2f26dfe630179737ec2ff08a8614f1f47abcaf |
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workflow.cwl
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https://github.com/reanahub/reana-demo-cms-h4l.git
Path: workflow/workflow.cwl Branch/Commit ID: 238f0e5a40d6c68ac010bb911ae5c4558c6f5ede |
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download_check.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/utils/download_check.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b |
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download_fastq.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/utils/download_fastq.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b |
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star_samtools_featurecounts_edger.cwl
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https://github.com/rawgene/cwl.git
Path: workflows/star_samtools_featurecounts_edger.cwl Branch/Commit ID: 54adf7fcfbf48c9cc4cfcf384e04eede39b5e5f6 |
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alignment_bwa_mem_prod.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_bwa_mem_prod.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b |
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upload_results.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/utils/upload_results.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b |
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spurious_annot
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: bb2f26dfe630179737ec2ff08a8614f1f47abcaf |
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sec-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf.cwl Branch/Commit ID: cf9d7cdefa6dfb3b678636da02bc55b6108c04ac |
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Unaligned bam to sorted, markduped bam
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263 |
