Explore Workflows

RNA-seq 04 quantification

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/04-quantification-se-unstranded.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 9c57dba

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw_cwl_parser_old/Examples/wrapper_paleocar/wf_wrapper_paleocar.cwl

Branch/Commit ID: master

https://github.com/NCGM-genome/WGSpipeline.git

Path: Workflows/germline-gpu-v4.2.0.cwl

Branch/Commit ID: main

This copy is for use with the new merged panel of normals

https://github.com/NCI-GDC/aliquot-maf-cwl.git

Path: vcf-to-aliquot-maf/vcf_to_aliquot_maf_wf.cwl

Branch/Commit ID: main

Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step2-dada2.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: qiime2-08-taxonomic-analysis.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines11-extra-step-wf.cwl

Branch/Commit ID: master

https://github.com/morgantaschuk/one-workflow-many-ways.git

Path: cwl/workflow.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/scatter-wf4.cwl

Branch/Commit ID: master

Packed ID: main

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/InterProScan-v5-chunked-wf.cwl

Branch/Commit ID: assembly