Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph collate_unique_rRNA_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_rRNA_headers.cwl

Branch/Commit ID: e1b0fce
workflow graph Identifies non-coding RNAs using Rfams covariance models

https://github.com/EBI-Metagenomics/workflow-is-cwl.git

Path: workflows/cmsearch-multimodel-wf.cwl

Branch/Commit ID: master
workflow graph Detect Docm variants

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/docm_cle.cwl

Branch/Commit ID: downsample_and_recall
workflow graph contig construction and protein prediction

\"This workflow performs construction of metagenomic contigs and prediction protein sequences for metagenomic contigs. It executes 2 processes: contig construction and protein prediction. related CWL file: ./Tools/06_bwa_mem.cwl ./Tools/07_samtools_sort.cwl ./Tools/08_samtools_flagstat.cwl\"

https://github.com/RyoMameda/workflow_cwl.git

Path: Workflow/metagenomic_contig_mapping_sw.cwl

Branch/Commit ID: main
workflow graph rhapsody_pipeline_2.0.cwl#VDJ_Assemble_and_Annotate_Contigs_TCR.cwl

https://github.com/Chi-CRL/cwl_check_workflow.git

Path: rhapsody_pipeline_2.0.cwl

Branch/Commit ID: main

Packed ID: VDJ_Assemble_and_Annotate_Contigs_TCR.cwl
workflow graph Pipeline for evaluating differential expression of genes across datasets

https://github.com/hubmapconsortium/rna-data-products.git

Path: steps/secondary-analysis.cwl

Branch/Commit ID: main
workflow graph tRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 0cd2d70
workflow graph workflow.cwl

https://github.com/lonbar/workflow.git

Path: workflow.cwl

Branch/Commit ID: main
workflow graph hi-c-processing-pairs.cwl

https://github.com/4dn-dcic/docker-4dn-hic.git

Path: cwl/hi-c-processing-pairs.cwl

Branch/Commit ID: master
workflow graph STAR-Alignment-PE

This workflow aligns the fastq files using STAR for no spliced genomes

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Alignments/star-alignment-nosplice.cwl

Branch/Commit ID: master